Semiparametric analysis of clustered interval‐censored survival data using soft Bayesian additive regression trees (SBART)

Bayesian semiparametric additive quantile regression

Quantile regression provides a convenient framework for analyzing the impact of covariates on the complete conditional distribution of a response variable instead of only the mean. While frequentist treatments of quantile regression are typically completely nonparametric, a Bayesian formulation relies on assuming the asymmetric Laplace distribution as auxiliary error distribution that yields po...

Bayesian Additive Regression Trees

We develop a Bayesian “sum-of-trees” model where each tree is constrained by a regularization prior to be a weak learner, and fitting and inference are accomplished via an iterative Bayesian backfitting MCMC algorithm that generates samples from a posterior. Effectively, BART is a nonparametric Bayesian regression approach which uses dimensionally adaptive random basis elements. Motivated by en...

Semiparametric regression for clustered data

We consider estimation in a semiparametric partially generalised linear model for clustered data using estimating equations. A marginal model is assumed where the mean of the outcome variable depends on some covariates parametrically and a cluster-level covariate nonparametrically. A profile-kernel method allowing for working correlation matrices is developed. We show that the nonparametric par...

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Parallel Bayesian Additive Regression Trees

Bayesian Additive Regression Trees (BART) is a Bayesian approach to flexible non-linear regression which has been shown to be competitive with the best modern predictive methods such as those based on bagging and boosting. BART offers some advantages. For example, the stochastic search Markov Chain Monte Carlo (MCMC) algorithm can provide a more complete search of the model space and variation ...